DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4ad1 and Cyp4f4

DIOPT Version :10

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_775146.1 Gene:Cyp4f4 / 286904 RGDID:708363 Length:522 Species:Rattus norvegicus


Alignment Length:525 Identity:153/525 - (29%)
Similarity:261/525 - (49%) Gaps:42/525 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLIAIAIILATILVFKGVRIFNYIDHMAGIMEMIPGPTPYP-FVGNLFQFGLKPAEYP-KKVLQ 63
            :.||..:.:|..:|....: .:....|:..    .|.|..:. |:|:|..  :.|.|.. |:|.:
  Rat    22 LLLIGASWLLVRVLTQTYI-FYRTYQHLCD----FPQPPKWNWFLGHLGM--ITPTEQGLKQVTK 79

  Fly    64 YCRKYDFQGFRS-LVFLQYHMMLSDPAEIQNILS-SSSLLYKEHL-YSFLRPWLGDGLLTSSGAR 125
            ....|. |||.: |..:...:.|..|..|:::|| |:|:..||.: ||||:||||||||.|.|.:
  Rat    80 LVATYP-QGFMTWLGPILPIITLCHPDVIRSVLSASASVALKEVIFYSFLKPWLGDGLLLSDGDK 143

  Fly   126 WLKHQKLYAPAFERSAIEGYLRVVH-RTGGQFVQKLDVLSDTQEVFDAQELVAKCTLDIVCENAT 189
            |..|:::..|||..:.::.|:::.: .|.....:..|:.|......|..:.::..|||.: :...
  Rat   144 WSCHRRMLTPAFHFNILKPYVKIFNDSTNIMHAKWQDLASGGSARLDMFKNISLMTLDSL-QKCV 207

  Fly   190 GQDSSSLNGETSDLHGAIKDLCDVVQERTFSIVKRFDALFRLTSYYMKQRRALSLLRSELNRIIS 254
            ....|:...:.|:...||.:|..:|.:|...::...|:|::||....:..:|..|:.:..:.:|.
  Rat   208 FSFDSNCQEKPSEYISAILELSALVAKRYQQLLLHTDSLYQLTHNGRRFHKACKLVHNFTDAVIQ 272

  Fly   255 QRRHQLAA--ENTCQQGQPINK--PFLDVLLTAK-LDGKVLKEREIIEEVSTFIFTGHDPIAAAI 314
            .||..|.:  |:...:.:..:|  .|:||||..| .|||.|.:.:|..|..||:|.|||..|:.:
  Rat   273 GRRRALPSQHEDDILKAKARSKTLDFIDVLLLTKDEDGKELSDEDIRAEADTFMFEGHDTTASGL 337

  Fly   315 SFTLYTLSRHSEIQQKAAEEQRRIFGENFAGEADLARLDQMHYLELIIRETLRLYPSVPLIARTN 379
            |:.||.|:||.|.|::..:|.|.:..:..:.|.:...|.|:.:|.:.|:|:|||:|.|.:|:|..
  Rat   338 SWILYNLARHPEYQERCRQEVRELLRDRESTEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRRC 402

  Fly   380 RNPIDI-NGTKVAKCTTVIMCLIAMGYNEKYFDDPCTFRPERFENPTGNVGIEAFKSVPFSAGPR 443
            ...|.: :|..:.|....|:.:.|..:|...:.||..:.|.||: |...........:|||||||
  Rat   403 TQDIVLPDGRVIPKGVICIINIFATHHNPTVWPDPEVYDPFRFD-PENIKDRSPLAFIPFSAGPR 466

  Fly   444 RCIAEKFAMYQMKALLSQLLRRFEILPAVDGLPPGINDHSREDCVPQSEYDPVLNIRVTLKSENG 508
            .||.:.|||.:||..|:..|.||.:||                    .:.:|.....:.|::|.|
  Rat   467 NCIGQTFAMNEMKVALALTLLRFRVLP--------------------DDKEPRRKPELILRAEGG 511

  Fly   509 IQIRL 513
            :.:|:
  Rat   512 LWLRV 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 CYP4 73..511 CDD:410721 135/447 (30%)
Cyp4f4NP_775146.1 CYP4F 74..515 CDD:410772 140/463 (30%)

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