DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ad1 and cyp-25A4

DIOPT Version :9

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_497779.1 Gene:cyp-25A4 / 183248 WormBaseID:WBGene00007967 Length:501 Species:Caenorhabditis elegans


Alignment Length:568 Identity:139/568 - (24%)
Similarity:227/568 - (39%) Gaps:134/568 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLIAIAIILATILVFKGVRIFNYIDHMAGIMEM-----IPGPTPYPFVGNLF------------ 48
            |.::.|:.|..||:.|....|:    ....|.::     ||||..:...|||.            
 Worm     1 MAILIISTIFFTIITFISYSIW----RRHAIFKLRSSIGIPGPPVHWLWGNLNIIKDRVSRLGYN 61

  Fly    49 ---------------QFGLKPAEYPKKVLQYCRKYDFQGFRSLVFLQYHMMLSDPAEIQNILSSS 98
                           .|||           ||.            .|.|:.:|:..:|:.|...:
 Worm    62 DTTQWHPTLHTKYGPIFGL-----------YCG------------TQLHITVSEEEDIKEIFIQN 103

  Fly    99 SLLYKEHLYS--FLRPWLGDGLLTSSGARWLKH-QKLYAPAFERSAIEGYLRVVHRTGGQFVQKL 160
            ...:.:.:..  |....|...||.::.|...|| :...||.|.    .|.::.:|.|   .|.|:
 Worm   104 FSNFSDRMTPDIFGMNQLNQSLLQNTYATGWKHTRSAIAPIFS----TGKMKAMHET---LVSKI 161

  Fly   161 DVL-------SDTQEVFDAQELVAKCTLDIVCENATGQDSSSLNGETSDLHGAIKDLCDVVQERT 218
            |:.       |.:.:.:|..|.....:|||:.:.|...||:.....| ||.        .||.|.
 Worm   162 DIFLEVLKEKSSSGQKWDIFENFQSLSLDIIGKCAFAIDSNCQRDRT-DLF--------YVQARK 217

  Fly   219 FSIVKRFDALFRLTSYYMKQRRALSLLRSELN---RIISQRRHQLAAE-------------NTCQ 267
            |     ..|:....|:.:    .:||:..||:   |.:.:.....|||             ....
 Worm   218 F-----VGAVDLKKSWIL----PVSLILPELSWLWRFLYKFSDLSAAELPLVKGLVDLYDRRRAG 273

  Fly   268 QGQPINKPFLDVLLTAKLDGKVLKEREIIEEVSTFIFTGHDPIAAAISFTLYTLSRHSEIQQKAA 332
            :|...:...|::|:..:..|| :.:||:||....|:..|::..:.|:.|:.|.|:.:..:|||..
 Worm   274 EGGNDSTDLLNLLIRRETIGK-MTQREVIENCFAFLIAGYETTSTAMMFSAYLLAEYPIVQQKLY 337

  Fly   333 EEQRRIFGENFAGEADLARLDQMHYLELIIRETLRLYPSVPLIARTNR---NPIDINGTKVAKCT 394
            ||.::. .||.....|  .:..|.||:.:.:|:||.||  |....|||   |.:.|.|....:.:
 Worm   338 EEIKKT-KENAGLNYD--SIHNMKYLDCVYKESLRFYP--PTTHFTNRVCLNDMTIRGQIYPEDS 397

  Fly   395 TVIMCLIAMGYNEKYFDDPCTFRPERFENPTGNVGIEAFKSVPFSAGPRRCIAEKFAMYQMKALL 459
            |:.:....:..|...::.|..|:||||||  ......:.|.:||..|||.|:..:||..:.|..:
 Worm   398 TLKVQPYTIHRNPANWESPDEFQPERFEN--WEEKSSSLKWIPFGVGPRYCVGMRFAEMEFKTTI 460

  Fly   460 SQLLRRFEILPAVDGLPPGINDHSREDCVPQSE---YDPVLNIRVTLK 504
            ::||..|| |..|.|.||         .:|::.   :.|...:|:.||
 Worm   461 AKLLDTFE-LSLVPGDPP---------MIPETNGVIFRPRSPVRLNLK 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 p450 36..470 CDD:278495 120/489 (25%)
cyp-25A4NP_497779.1 p450 37..489 CDD:278495 126/517 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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