DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4ad1 and cyp-25A1

DIOPT Version :9

Sequence 1:NP_610380.1 Gene:Cyp4ad1 / 35821 FlyBaseID:FBgn0033292 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_497775.3 Gene:cyp-25A1 / 183247 WormBaseID:WBGene00007963 Length:502 Species:Caenorhabditis elegans


Alignment Length:555 Identity:134/555 - (24%)
Similarity:214/555 - (38%) Gaps:113/555 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLIAIAIILATILVFKGVRIFNYIDHMAGIMEMI--PGPTPYPFVGNLFQFGLKPAEYPKKVLQ 63
            :|...|.||||....||             :.|.|  .||.|:.|:|||.|    .||..:|:  
 Worm    13 IFTFFIYIILARRERFK-------------LREKIGLSGPEPHWFLGNLKQ----TAERKEKL-- 58

  Fly    64 YCRKYD-------------FQGFRSLVFLQYHMMLSDPAEIQNIL----------SSSSLLYKEH 105
               .||             .:.|......|.::::|:..:|:.:.          |..|:.....
 Worm    59 ---GYDDANRWFNELHEQYGETFGIYYGSQMNIVISNEKDIKEVFIKNFSNFSDRSVPSIYEANQ 120

  Fly   106 LYSFLRPWLGDGLLTSSGARWLKHQKLYAPAFERSAIEGYLRVVHRTGGQFV----------QKL 160
            |.:.|       |:.|..:.|...:...||.|....::.....::.....|:          ||.
 Worm   121 LTASL-------LMNSYSSGWKHTRSAIAPIFSTGKMKAMQETINSKVDLFLDILREKASSGQKW 178

  Fly   161 DVLSDTQEVFDAQELVAKCTLDIVCENATGQDSSSLNGETSDLHGAIKDLCDVVQERTFSIVKRF 225
            |:..|.|.:          |||::.:.|...||:.........:...|.....:..|...|:...
 Worm   179 DIYDDFQGL----------TLDVIGKCAFAIDSNCQRDRNDVFYVNAKKYISNIDIRHSKIIAAS 233

  Fly   226 DALFRLTSYYMKQRRALSLLRSE------LNRIISQRRHQLAAENTCQQGQPINKPFLDVLLTAK 284
            ..|..|::::....:...|..:|      |:.:..:||....:::.         ..|.:||..:
 Worm   234 VLLPELSTFWKALYKYTPLADAEIPLVEGLSNVYERRRGGEGSDSV---------DLLKLLLNRE 289

  Fly   285 LD-GKVLKEREIIEEVSTFIFTGHDPIAAAISFTLYTLSRHSEIQQKAAEEQRRIFGENFAGEAD 348
            .| .|.:.::|:||....|:..|::..:.|:::..|.||::..:|||..||   |......|...
 Worm   290 DDKSKPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQQKLYEE---IMEAKENGGLT 351

  Fly   349 LARLDQMHYLELIIRETLRLYPSV-PLIARTNRNPIDINGTKVAKCTTVIMCLIAMGYNEKYFDD 412
            ...:..|.||:.:.:||||.||.| ..|.|..|..|.|.|....|...|:.....:..|.:.:|.
 Worm   352 YDSIHNMKYLDCVYKETLRFYPPVIHFIRRLCREDITIRGQFYPKGAIVVCLPHTVHRNPENWDS 416

  Fly   413 PCTFRPERFENPTGNVGIEAFKSVPFSAGPRRCIAEKFAMYQMKALLSQLLRRFEILP---AVDG 474
            |..|.||||||  ......:.|.:||..|||.|:..:||..:.|..:.:||..||:..   ..|.
 Worm   417 PEEFHPERFEN--WEEKSSSLKWIPFGVGPRYCVGMRFAEMEFKTTIVKLLDTFELKQFEGEADL 479

  Fly   475 LPPGINDHSREDC--VPQSEYDPVLNIRVTLKSEN 507
            :|         ||  |.....|||   |:.||..|
 Worm   480 IP---------DCNGVIMRPNDPV---RLHLKPRN 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4ad1NP_610380.1 p450 36..470 CDD:278495 112/474 (24%)
cyp-25A1NP_497775.3 p450 37..496 CDD:278495 120/510 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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