DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr100A

DIOPT Version :9

Sequence 1:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_651829.1 Gene:Cpr100A / 43657 FlyBaseID:FBgn0039805 Length:241 Species:Drosophila melanogaster


Alignment Length:111 Identity:30/111 - (27%)
Similarity:54/111 - (48%) Gaps:7/111 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCALVALVAA---NENPEVKELVND---VQADG-FVSKLVLDNGSAASATGDVHGNIDG 58
            ||:.|.:..||||.::   :::|:...::::   :..|| |.:....::|.......|..|...|
  Fly     1 MFRFLALTTLVALASSQHYHQDPKTAAIISEQRYLSGDGKFGAAYEQEDGINFKEETDADGTRHG 65

  Fly    59 VFEWVSPEGEHVRVSYKADENGYQPQSDLLPTPPPIPEAILKAIAY 104
            .:.::.|.|:...:||.|.:||:|...|.||..||.|...:....|
  Fly    66 SYSYLDPTGQRRTISYTAGKNGFQASGDHLPQAPPAPPQPVPTAGY 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 10/40 (25%)
Cpr100ANP_651829.1 Chitin_bind_4 44..88 CDD:278791 10/43 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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