DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr78Cb

DIOPT Version :10

Sequence 1:NP_476622.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_649299.2 Gene:Cpr78Cb / 40353 FlyBaseID:FBgn0037068 Length:140 Species:Drosophila melanogaster


Alignment Length:109 Identity:34/109 - (31%)
Similarity:54/109 - (49%) Gaps:4/109 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KILLVCALVALVAANE-NPEVKEL-VNDVQADG-FVSKLVLDNGSAASATGDVHGNIDGVFEWVS 64
            :::.|..:..||.|:| :..:.:. |:....:| |.......||....|.|.....| |::.:.|
  Fly    21 RLVRVRRIRRLVGASERDARITDFRVSPTDDEGVFKYAFKTSNGIDVQAAGSPLETI-GIYSYTS 84

  Fly    65 PEGEHVRVSYKADENGYQPQSDLLPTPPPIPEAILKAIAYIQAH 108
            |||..:...|.|||.|:......||.|||.|:.||:::.||:.|
  Fly    85 PEGVPIETRYIADELGFHVVGRHLPQPPPTPDYILRSLEYIRTH 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_476622.1 Chitin_bind_4 40..81 CDD:459790 14/40 (35%)
Cpr78CbNP_649299.2 Chitin_bind_4 55..101 CDD:459790 15/46 (33%)

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