DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr67Fb

DIOPT Version :9

Sequence 1:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_648420.1 Gene:Cpr67Fb / 39225 FlyBaseID:FBgn0036110 Length:122 Species:Drosophila melanogaster


Alignment Length:114 Identity:46/114 - (40%)
Similarity:67/114 - (58%) Gaps:5/114 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCAL---VALVAANEN-PEVKELVNDVQADGFVS-KLVLDNGSAASATGDVHGNIDGVF 60
            |.|..|:.:|   .|:.||:|: .|..:..|:::.||..| :....||..|..:|.......|..
  Fly     1 MIKTALIISLFLVAAIRAADESQAETTKYRNEIKPDGSYSWEYGTSNGIDAQESGVGGVQAAGSV 65

  Fly    61 EWVSPEGEHVRVSYKADENGYQPQSDLLPTPPPIPEAILKAIAYIQAHP 109
            .:.:|:|..:::.|.||||||:|....||||||||:.||||:|||:|||
  Fly    66 SYAAPDGTPIQLEYTADENGYRPTGAHLPTPPPIPDYILKALAYIEAHP 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 12/40 (30%)
Cpr67FbNP_648420.1 Chitin_bind_4 39..86 CDD:278791 13/46 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470170
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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