DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr65Ec

DIOPT Version :9

Sequence 1:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_648077.1 Gene:Cpr65Ec / 38775 FlyBaseID:FBgn0035737 Length:127 Species:Drosophila melanogaster


Alignment Length:116 Identity:43/116 - (37%)
Similarity:66/116 - (56%) Gaps:5/116 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FKILLVCAL-VALVAANE---NPEVKELVNDVQADG-FVSKLVLDNGSAASATGDVHGNIDGVFE 61
            |.:|.|.|| |:.|.|:.   ..|.:|..:|::.|| :..:....||.|...:|.......|...
  Fly     4 FFVLAVAALAVSCVQADSFDARAETREYKSDLKEDGSYAYQYQTSNGIAGQESGVGGYYASGSNA 68

  Fly    62 WVSPEGEHVRVSYKADENGYQPQSDLLPTPPPIPEAILKAIAYIQAHPSKE 112
            :.:|:|:.::::|.||.|||.|....||||||||.:|||::.||:.||.:|
  Fly    69 YYAPDGQLIQLTYTADSNGYHPAGAHLPTPPPIPASILKSLEYIRTHPQQE 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 11/40 (28%)
Cpr65EcNP_648077.1 Chitin_bind_4 41..88 CDD:278791 11/46 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470165
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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