DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr65Ea

DIOPT Version :9

Sequence 1:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_648075.1 Gene:Cpr65Ea / 38773 FlyBaseID:FBgn0035735 Length:127 Species:Drosophila melanogaster


Alignment Length:125 Identity:54/125 - (43%)
Similarity:71/125 - (56%) Gaps:23/125 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCALVALVAA---NENPEVKELVN---------DV-QADGFVSKLVLDNGSAASATGDV 52
            |:|:|||.||.....|   |::...|.|.|         |: ||.|...|   :.|.|..   :.
  Fly     1 MYKLLLVVALFGCALAAPLNDDTITKFLANQDTDGTYAYDIEQASGIQIK---EEGLAGH---EA 59

  Fly    53 HGNIDGVFEWVSPEGEHVRVSYKADENGYQPQSDLLPTPPPIPEAILKAIAYIQAHPSKE 112
            ||:    :.::||||..|:|.|.|||.|:.|||:||||||||||.||::|.|||.||:.|
  Fly    60 HGS----YSYISPEGIPVQVVYTADEFGFHPQSNLLPTPPPIPEEILRSIRYIQEHPTPE 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 14/40 (35%)
Cpr65EaNP_648075.1 Chitin_bind_4 37..84 CDD:306811 19/56 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439267
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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