DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr49Ag

DIOPT Version :10

Sequence 1:NP_476622.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_610776.1 Gene:Cpr49Ag / 36353 FlyBaseID:FBgn0033730 Length:134 Species:Drosophila melanogaster


Alignment Length:135 Identity:36/135 - (26%)
Similarity:51/135 - (37%) Gaps:45/135 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFK-ILLVCALVALVAANENPE------------------VK-ELVNDVQADG-FVSKLVLDNGS 44
            |:| :.|||:.:.|......|:                  || :.||:  ||| |.|.....||.
  Fly     1 MYKLVFLVCSALLLSYVLARPQDQRAGATSAATTTTAATIVKQDNVNN--ADGSFNSSYETSNGI 63

  Fly    45 AASATG------------------DVHGNI----DGVFEWVSPEGEHVRVSYKADENGYQPQSDL 87
            .....|                  |.|..:    .|.:.:..|:|..:.:.|.|||||:||:.|.
  Fly    64 RVENIGYLKKIIVPKTETSDGQVIDEHEELVLVQTGSYSYSDPDGNLITLRYVADENGFQPEGDH 128

  Fly    88 LPTPP 92
            ||..|
  Fly   129 LPVAP 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_476622.1 Chitin_bind_4 40..81 CDD:459790 13/62 (21%)
Cpr49AgNP_610776.1 Chitin_bind_4 53..122 CDD:459790 15/68 (22%)

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