DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr49Ag

DIOPT Version :9

Sequence 1:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_610776.1 Gene:Cpr49Ag / 36353 FlyBaseID:FBgn0033730 Length:134 Species:Drosophila melanogaster


Alignment Length:135 Identity:36/135 - (26%)
Similarity:51/135 - (37%) Gaps:45/135 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFK-ILLVCALVALVAANENPE------------------VK-ELVNDVQADG-FVSKLVLDNGS 44
            |:| :.|||:.:.|......|:                  || :.||:  ||| |.|.....||.
  Fly     1 MYKLVFLVCSALLLSYVLARPQDQRAGATSAATTTTAATIVKQDNVNN--ADGSFNSSYETSNGI 63

  Fly    45 AASATG------------------DVHGNI----DGVFEWVSPEGEHVRVSYKADENGYQPQSDL 87
            .....|                  |.|..:    .|.:.:..|:|..:.:.|.|||||:||:.|.
  Fly    64 RVENIGYLKKIIVPKTETSDGQVIDEHEELVLVQTGSYSYSDPDGNLITLRYVADENGFQPEGDH 128

  Fly    88 LPTPP 92
            ||..|
  Fly   129 LPVAP 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 13/62 (21%)
Cpr49AgNP_610776.1 Chitin_bind_4 53..122 CDD:278791 15/68 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439253
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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