DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr49Af

DIOPT Version :10

Sequence 1:NP_476622.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_610775.1 Gene:Cpr49Af / 36352 FlyBaseID:FBgn0033729 Length:126 Species:Drosophila melanogaster


Alignment Length:121 Identity:45/121 - (37%)
Similarity:72/121 - (59%) Gaps:14/121 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KILLVCALVALVAA---NENPEVKELVNDVQADG-FVSKLVLDNGSAASATG-------DVHG-N 55
            |.|::.||..:.|:   |::|..:|  ::|:.:| :.....|.:||.|:..|       |.:| :
  Fly     2 KYLMLIALFVVAASATDNDDPISQE--SNVEYNGKYHYHYELKDGSKATQDGVLKSVNADHNGES 64

  Fly    56 IDGVFEWVSPEGEHVRVSYKADENGYQPQSDLLPTPPPIPEAILKAIAYIQAHPSK 111
            ::|.:.:|:.:|:...|||.||||||....|.||||||.|.::|||:.||:.||.|
  Fly    65 VNGKYSFVADDGKTYVVSYTADENGYLAVGDHLPTPPPTPVSVLKALEYIRLHPYK 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_476622.1 Chitin_bind_4 40..81 CDD:459790 17/48 (35%)
Cpr49AfNP_610775.1 Chitin_bind_4 35..90 CDD:459790 17/54 (31%)

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