DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr49Ae

DIOPT Version :9

Sequence 1:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_610774.3 Gene:Cpr49Ae / 36351 FlyBaseID:FBgn0033728 Length:134 Species:Drosophila melanogaster


Alignment Length:110 Identity:38/110 - (34%)
Similarity:57/110 - (51%) Gaps:19/110 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VALVAANENPE-------VKELVNDVQADGFVSKLVLDNGSAASATGDVHGNI---DGVFEWVSP 65
            :|:::...|.|       ..|..|.::|:        :.|:...||.....::   .|...:.||
  Fly    28 IAIISQESNIEPDGSYNYAYETANGIKAE--------ETGTLKKATSPDSSDVIIARGSVSYTSP 84

  Fly    66 EGEHVRVSYKA-DENGYQPQSDLLPTPPPIPEAILKAIAYIQAHP 109
            ||..:.::|.| ||||:|||.|.||||||||.||.||:.|:.:.|
  Fly    85 EGNLITLNYSADDENGFQPQGDHLPTPPPIPPAIQKALDYLLSLP 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 13/44 (30%)
Cpr49AeNP_610774.3 Chitin_bind_4 43..101 CDD:278791 16/65 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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