DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr47Eb

DIOPT Version :9

Sequence 1:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_610655.1 Gene:Cpr47Eb / 36189 FlyBaseID:FBgn0033598 Length:214 Species:Drosophila melanogaster


Alignment Length:117 Identity:28/117 - (23%)
Similarity:48/117 - (41%) Gaps:34/117 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCALVALVA---------ANENPEVKELV------NDVQADGFV-------------SK 37
            |||| .:| |:|||.         .:...|.:|:|      .:...||..             .:
  Fly     1 MFKI-AIC-LLALVGGSLAASIGQVDSTTEKREIVPLLRFETNKNPDGSFHFSYEGGDQSVRQEQ 63

  Fly    38 LVLDNGSAASATGDVHGNIDGVFEWVSPEGEHVRVSYKADENGYQPQSDLLP 89
            .|::|    :.|.|....:.|::.::..:|..|.|.|.|.:||:.|...::|
  Fly    64 GVIEN----AGTEDEALEVSGMYSYIDADGNTVEVHYTAGKNGFVPIGTIIP 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 10/40 (25%)
Cpr47EbNP_610655.1 Chitin_bind_4 48..103 CDD:278791 11/58 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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