DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr11B

DIOPT Version :9

Sequence 1:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_572807.1 Gene:Cpr11B / 32203 FlyBaseID:FBgn0030398 Length:197 Species:Drosophila melanogaster


Alignment Length:94 Identity:23/94 - (24%)
Similarity:41/94 - (43%) Gaps:18/94 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ENPEVKELVNDVQAD-------GFVSKLVLDNGSAASATGDVHG-------NIDGVFEWVSPEGE 68
            :.|::..:.:|..:|       ||.:    .||.....||:..|       .:.|.:.:...:|:
  Fly    66 QQPQIPIVRSDYNSDANGNYNFGFDT----GNGIHRDETGEFRGGWPHGSLGVQGSYSYTGDDGK 126

  Fly    69 HVRVSYKADENGYQPQSDLLPTPPPIPEA 97
            ...|:|.||:||:..:...||..|.:|.|
  Fly   127 QYTVNYTADKNGFHAEGAHLPVSPSVPAA 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 12/47 (26%)
Cpr11BNP_572807.1 Chitin_bind_4 85..139 CDD:278791 14/57 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439211
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D146314at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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