DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and Cpr11A

DIOPT Version :9

Sequence 1:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_572803.1 Gene:Cpr11A / 32198 FlyBaseID:FBgn0030394 Length:270 Species:Drosophila melanogaster


Alignment Length:143 Identity:33/143 - (23%)
Similarity:52/143 - (36%) Gaps:46/143 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCALVALVAAN-------------ENP-EVKELVNDVQAD-------GFVSK------- 37
            |...|::....||.||:             .|| ::..|..|:..|       |.|.|       
  Fly     1 MKSFLILLGFAALAAADVKHLTDRNLDLFKYNPSDIYTLPEDIDDDKPAVHFSGDVMKAKTETLQ 65

  Fly    38 -----------LVLDNGSAASATGDVHGN----IDGVFEWVSPEGEHVRVSYKADENGYQPQSDL 87
                       |...||...|:.|.:..:    :.|.:.:...:|:..:..|.|||.||.|.::|
  Fly    66 NYNSGKKFKLELKTQNGIEVSSVGKLKDDKTFVVSGSYSFTGADGKRYKTRYTADEFGYHPITEL 130

  Fly    88 ---LPTPPPIPEA 97
               :|.|.|:..|
  Fly   131 DLDIPEPQPLASA 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 10/44 (23%)
Cpr11ANP_572803.1 Chitin_bind_4 73..124 CDD:278791 11/50 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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