DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and LOC1279297

DIOPT Version :10

Sequence 1:NP_476622.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:XP_318998.3 Gene:LOC1279297 / 1279297 VectorBaseID:AGAMI1_002902 Length:250 Species:Anopheles gambiae


Alignment Length:94 Identity:38/94 - (40%)
Similarity:51/94 - (54%) Gaps:11/94 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NDVQADGFVS-KLVLDNGSAASATG--------DVHGN-IDGVFEWVSPEGEHVRVSYKADENGY 81
            |||..||..| .....:|....|.|        |:... :.|.:.:.||||:.:.|:|.|||||:
Mosquito   125 NDVSYDGSYSYAYTTGDGQQQQAQGYLKNAGRKDLEAQAVQGSYSYTSPEGQLITVTYIADENGF 189

  Fly    82 QPQSDLLPTPPPIPEAILKAIAYI-QAHP 109
            :.:...|||||||||||.|::|.| |..|
Mosquito   190 RAEGAHLPTPPPIPEAIQKSLALIAQTQP 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_476622.1 Chitin_bind_4 40..81 CDD:459790 15/49 (31%)
LOC1279297XP_318998.3 Chitin_bind_4 133..189 CDD:459790 16/55 (29%)

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