DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp4 and LOC1277342

DIOPT Version :10

Sequence 1:NP_476622.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:XP_316784.4 Gene:LOC1277342 / 1277342 VectorBaseID:AGAMI1_015005 Length:227 Species:Anopheles gambiae


Alignment Length:105 Identity:30/105 - (28%)
Similarity:50/105 - (47%) Gaps:10/105 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCALVALVAANEN------PEVKELVNDVQ---ADG-FVSKLVLDNGSAASATGDVHGN 55
            ||:.:|:..|:....|..|      |:...::::.:   .|| |.:....::|:......|..||
Mosquito     1 MFRFVLLSTLLVAATAQYNGGYHRDPKTAAILSEQRYQSGDGKFGAAYTQEDGTDFKEETDEQGN 65

  Fly    56 IDGVFEWVSPEGEHVRVSYKADENGYQPQSDLLPTPPPIP 95
            ..|.:.:|.|.|:...:||.|.:||:|...|.||..||.|
Mosquito    66 RRGSYSYVDPTGQRRTISYVAGKNGFQASGDHLPVAPPAP 105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_476622.1 Chitin_bind_4 40..81 CDD:459790 12/40 (30%)
LOC1277342XP_316784.4 Chitin_bind_4 47..91 CDD:459790 12/43 (28%)

Return to query results.
Submit another query.