DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and LOC1276146

DIOPT Version :10

Sequence 1:NP_476622.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:XP_315456.3 Gene:LOC1276146 / 1276146 -ID:- Length:146 Species:Anopheles gambiae


Alignment Length:127 Identity:49/127 - (38%)
Similarity:66/127 - (51%) Gaps:15/127 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCA-LVALVAA---------NENPEVKELV----NDVQADGFVS-KLVLDNGSAASATG 50
            ||:.:...| |||.|||         .:||:....:    |.::.||..: .....||.||...|
Mosquito     1 MFRFVFAAALLVATVAAGPLDRAYSHQQNPDAHAQIVAYENVLKDDGHYNWSYETSNGIAAHEEG 65

  Fly    51 DVHGNIDGVFEWVSPEGEHVRVSYKADENGYQPQSDLLPTPPPIPEAILKAIAYIQAHPSKE 112
            ....|.:|.|.:..|:|...||.|.|||||:|||.|.||||||.||.:.|.:..|:|:|.|:
Mosquito    66 LGAHNANGAFSYTGPDGVLYRVVYVADENGFQPQGDHLPTPPPTPEHVFKTLEQIRANPPKD 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_476622.1 Chitin_bind_4 40..81 CDD:459790 17/40 (43%)
LOC1276146XP_315456.3 Chitin_bind_4 49..96 CDD:459790 17/46 (37%)

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