DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp4 and LOC1270060

DIOPT Version :10

Sequence 1:NP_476622.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster
Sequence 2:XP_308723.3 Gene:LOC1270060 / 1270060 VectorBaseID:AGAMI1_008770 Length:150 Species:Anopheles gambiae


Alignment Length:131 Identity:38/131 - (29%)
Similarity:60/131 - (45%) Gaps:20/131 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCALVALVAANENPEVKELVNDVQADGFVSKLVL-------------------DNGSAA 46
            ||..:|:.|.|.:.:....|: |.|...:......|:.|:                   .||.||
Mosquito     1 MFSKVLILAAVTVCSVLAAPQ-KRLGGPLPLGTAESQAVILAQEQNHDPSGAYNYRYETSNGIAA 64

  Fly    47 SATGDVHGNIDGVFEWVSPEGEHVRVSYKADENGYQPQSDLLPTPPPIPEAILKAIAYIQAHPSK 111
            ..|.....|..|.:.:..|:|...||:|.||..|:|||...||..||:|:.:||::..|:|:|.:
Mosquito    65 QQTSYDGANAAGEYSYTGPDGVLYRVAYNADTYGFQPQGAHLPVEPPVPDHVLKSLEEIRANPPR 129

  Fly   112 E 112
            :
Mosquito   130 D 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp4NP_476622.1 Chitin_bind_4 40..81 CDD:459790 14/59 (24%)
LOC1270060XP_308723.3 Chitin_bind_4 52..99 CDD:459790 14/46 (30%)

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