DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp3 and Lcp65Af

DIOPT Version :9

Sequence 1:NP_001260803.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_477274.1 Gene:Lcp65Af / 45017 FlyBaseID:FBgn0020639 Length:100 Species:Drosophila melanogaster


Alignment Length:97 Identity:30/97 - (30%)
Similarity:49/97 - (50%) Gaps:8/97 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVCSLAALVAANANVEVKELVNDVQPDGFVSKLVLDDGSASSATGDIHG--------NIDGVFEW 62
            |:..:|....|.|:|::.:..:||.|..|.......|||::.|.|.:..        |:.|.:.:
  Fly     4 LIVFVALFALAVADVQILKQESDVGPVSFNYGYETSDGSSAQAAGQLKNVGTDEEALNVKGTYSF 68

  Fly    63 ISPEGVHVRVSYKADENGYQPQSDLLPTPPPI 94
            ::.:|....::|.|||||||||...||..|.:
  Fly    69 VADDGQTYSIAYTADENGYQPQGAHLPVAPVV 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 13/48 (27%)
Lcp65AfNP_477274.1 Chitin_bind_4 32..87 CDD:278791 14/54 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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