DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp3 and Cpr73D

DIOPT Version :9

Sequence 1:NP_001260803.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_001097627.1 Gene:Cpr73D / 39897 FlyBaseID:FBgn0036680 Length:597 Species:Drosophila melanogaster


Alignment Length:106 Identity:25/106 - (23%)
Similarity:42/106 - (39%) Gaps:18/106 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILLVCSLAALVAANANVEVKELVNDVQPDG-FVSKLVLDD--GSASSATGDIHGNIDGVFEWISP 65
            :||:|::....:..|..|::  .|.:..|| |..:...||  |...||:|.....:.|.:...||
  Fly    11 LLLLCAVLGYFSDPARAEIE--YNTISEDGSFQFRHANDDIGGYYHSASGTPDNTVRGRYGSRSP 73

  Fly    66 EGVHVRVS-YKADENGYQ------------PQSDLLPTPPP 93
            ....:..: |.|...|::            .|..:||...|
  Fly    74 ASGQIEETVYTAGPRGFRVNGPKIHRKMDLAQYPVLPRGSP 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 11/43 (26%)
Cpr73DNP_001097627.1 Chitin_bind_4 127..174 CDD:278791
Chitin_bind_4 <223..257 CDD:278791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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