DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp3 and Cpr65Ea

DIOPT Version :9

Sequence 1:NP_001260803.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_648075.1 Gene:Cpr65Ea / 38773 FlyBaseID:FBgn0035735 Length:127 Species:Drosophila melanogaster


Alignment Length:125 Identity:51/125 - (40%)
Similarity:71/125 - (56%) Gaps:27/125 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLV-----CSLAALVAANANVEVKELVN---------DV-QPDGFVSKLVLDDGSASSATG 50
            |:|:|||     |:|||  ..|.:...|.|.|         |: |..|...|   ::|.|..   
  Fly     1 MYKLLLVVALFGCALAA--PLNDDTITKFLANQDTDGTYAYDIEQASGIQIK---EEGLAGH--- 57

  Fly    51 DIHGNIDGVFEWISPEGVHVRVSYKADENGYQPQSDLLPTPPPIPAAILKAIAYIEANPS 110
            :.||:    :.:|||||:.|:|.|.|||.|:.|||:|||||||||..||::|.||:.:|:
  Fly    58 EAHGS----YSYISPEGIPVQVVYTADEFGFHPQSNLLPTPPPIPEEILRSIRYIQEHPT 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 15/40 (38%)
Cpr65EaNP_648075.1 Chitin_bind_4 37..84 CDD:306811 19/56 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439268
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1459720at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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