DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp3 and Cpr49Ah

DIOPT Version :10

Sequence 1:NP_476621.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_610777.1 Gene:Cpr49Ah / 36354 FlyBaseID:FBgn0033731 Length:190 Species:Drosophila melanogaster


Alignment Length:147 Identity:42/147 - (28%)
Similarity:59/147 - (40%) Gaps:42/147 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KILLVCSLAALVA------ANANVEVKELVNDVQPDGF----------------VSKLVLDDGSA 45
            |:|::..|.|:..      .:.:..|..:..|.:||..                .:|...||||.
  Fly     2 KVLILLVLLAISCQGQHHHQHQHQNVNNIPRDDKPDHHRHEDHRETSTWIPIIKYNKEQSDDGSY 66

  Fly    46 SS-----------ATG---DIHGNIDGV------FEWISPEGVHVRVSYKADENGYQPQSDLLPT 90
            .:           .||   |...|.:||      :.:.||||..|.|.|.|||||::...|.:||
  Fly    67 KTEYETGNSIIHEETGFLKDFDTNPNGVLVQHGQYSYQSPEGTLVNVQYTADENGFRATGDHIPT 131

  Fly    91 PPPIPAAILKAIAYIEA 107
            ||.||..|.|.:..|.|
  Fly   132 PPAIPEEIQKGLDQIYA 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_476621.1 Chitin_bind_4 <46..81 CDD:459790 17/54 (31%)
Cpr49AhNP_610777.1 Chitin_bind_4 66..122 CDD:459790 17/55 (31%)

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