DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp3 and Cpr47Eb

DIOPT Version :9

Sequence 1:NP_001260803.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_610655.1 Gene:Cpr47Eb / 36189 FlyBaseID:FBgn0033598 Length:214 Species:Drosophila melanogaster


Alignment Length:129 Identity:35/129 - (27%)
Similarity:54/129 - (41%) Gaps:27/129 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVC-------SLAALVA-ANANVEVKELV------NDVQPDG-FVSKLVLDDGSASSATG 50
            |||| .:|       ||||.:. .::..|.:|:|      .:..||| |.......|.|.....|
  Fly     1 MFKI-AICLLALVGGSLAASIGQVDSTTEKREIVPLLRFETNKNPDGSFHFSYEGGDQSVRQEQG 64

  Fly    51 DIHG--------NIDGVFEWISPEGVHVRVSYKADENGYQPQSDLLP---TPPPIPAAILKAIA 103
            .|..        .:.|::.:|..:|..|.|.|.|.:||:.|...::|   |.....||:|..::
  Fly    65 VIENAGTEDEALEVSGMYSYIDADGNTVEVHYTAGKNGFVPIGTIIPKEITELAKSAALLPKVS 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_001260803.1 Chitin_bind_4 40..81 CDD:278791 12/48 (25%)
Cpr47EbNP_610655.1 Chitin_bind_4 48..103 CDD:278791 13/54 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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