DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp3 and Lcp2

DIOPT Version :10

Sequence 1:NP_476621.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster


Alignment Length:117 Identity:54/117 - (46%)
Similarity:74/117 - (63%) Gaps:8/117 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCSLAALVAANANV--------EVKELVNDVQPDGFVSKLVLDDGSASSATGDIHGNID 57
            |||.:::.::..:..|.|.|        :|....:||:.|||.|.|...:|...:|:||.||||.
  Fly     1 MFKFVMILAVVGVATALAPVSRSDDVHADVLSRSDDVRADGFDSSLHTSNGIEQAASGDAHGNIH 65

  Fly    58 GVFEWISPEGVHVRVSYKADENGYQPQSDLLPTPPPIPAAILKAIAYIEANP 109
            |.|.||||||.||.|.|.|:||||||....:|||||||.||.:|:|::|::|
  Fly    66 GNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHP 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_476621.1 Chitin_bind_4 <46..81 CDD:459790 22/34 (65%)
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 26/46 (57%)

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