DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp3 and Cpr11B

DIOPT Version :10

Sequence 1:NP_476621.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_572807.1 Gene:Cpr11B / 32203 FlyBaseID:FBgn0030398 Length:197 Species:Drosophila melanogaster


Alignment Length:63 Identity:18/63 - (28%)
Similarity:29/63 - (46%) Gaps:7/63 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 DGSASSATGDIHG-------NIDGVFEWISPEGVHVRVSYKADENGYQPQSDLLPTPPPIPAA 97
            :|.....||:..|       .:.|.:.:...:|....|:|.||:||:..:...||..|.:|||
  Fly    93 NGIHRDETGEFRGGWPHGSLGVQGSYSYTGDDGKQYTVNYTADKNGFHAEGAHLPVSPSVPAA 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_476621.1 Chitin_bind_4 <46..81 CDD:459790 10/41 (24%)
Cpr11BNP_572807.1 Chitin_bind_4 85..139 CDD:459790 11/45 (24%)

Return to query results.
Submit another query.