DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp3 and LOC1276152

DIOPT Version :10

Sequence 1:NP_476621.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:XP_315462.3 Gene:LOC1276152 / 1276152 VectorBaseID:AGAMI1_002743 Length:136 Species:Anopheles gambiae


Alignment Length:116 Identity:42/116 - (36%)
Similarity:65/116 - (56%) Gaps:4/116 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCSLAAL-VAANANVEVKELVND--VQPDG-FVSKLVLDDGSASSATGDIHGNIDGVFE 61
            ||::.::.:|||: ||.|.:.:.:.|.:|  |.||| :.......:|..:...|....:..|...
Mosquito     1 MFRVFVIAALAAVAVAQNPDADAQVLSSDSVVNPDGSYQWNYETSNGIRAQEQGVGGQSAQGSAS 65

  Fly    62 WISPEGVHVRVSYKADENGYQPQSDLLPTPPPIPAAILKAIAYIEANPSKN 112
            |...:|..:.::|.|||||||||.|.||...|:||.:||.:.:|.|||.|:
Mosquito    66 WTDRDGTPISLTYVADENGYQPQGDHLPREGPVPAHVLKTLEFIRANPPKD 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_476621.1 Chitin_bind_4 <46..81 CDD:459790 9/34 (26%)
LOC1276152XP_315462.3 Chitin_bind_4 38..85 CDD:459790 10/46 (22%)

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