DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp3 and LOC1276146

DIOPT Version :10

Sequence 1:NP_476621.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:XP_315456.3 Gene:LOC1276146 / 1276146 -ID:- Length:146 Species:Anopheles gambiae


Alignment Length:127 Identity:45/127 - (35%)
Similarity:64/127 - (50%) Gaps:15/127 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKILLVCS-LAALVAA-------------NANVEVKELVNDVQPDGFVS-KLVLDDGSASSATG 50
            ||:.:...: |.|.|||             :|:.::....|.::.||..: .....:|.|:...|
Mosquito     1 MFRFVFAAALLVATVAAGPLDRAYSHQQNPDAHAQIVAYENVLKDDGHYNWSYETSNGIAAHEEG 65

  Fly    51 DIHGNIDGVFEWISPEGVHVRVSYKADENGYQPQSDLLPTPPPIPAAILKAIAYIEANPSKN 112
            ....|.:|.|.:..|:||..||.|.|||||:|||.|.||||||.|..:.|.:..|.|||.|:
Mosquito    66 LGAHNANGAFSYTGPDGVLYRVVYVADENGFQPQGDHLPTPPPTPEHVFKTLEQIRANPPKD 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_476621.1 Chitin_bind_4 <46..81 CDD:459790 14/34 (41%)
LOC1276146XP_315456.3 Chitin_bind_4 49..96 CDD:459790 16/46 (35%)

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