DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp3 and LOC1270060

DIOPT Version :10

Sequence 1:NP_476621.1 Gene:Lcp3 / 35819 FlyBaseID:FBgn0002534 Length:112 Species:Drosophila melanogaster
Sequence 2:XP_308723.3 Gene:LOC1270060 / 1270060 VectorBaseID:AGAMI1_008770 Length:150 Species:Anopheles gambiae


Alignment Length:130 Identity:40/130 - (30%)
Similarity:61/130 - (46%) Gaps:18/130 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MF-KILL-----VCSLAA-----------LVAANANVEVKELVNDVQPDG-FVSKLVLDDGSASS 47
            || |:|:     |||:.|           |..|.:...:.....:..|.| :..:....:|.|:.
Mosquito     1 MFSKVLILAAVTVCSVLAAPQKRLGGPLPLGTAESQAVILAQEQNHDPSGAYNYRYETSNGIAAQ 65

  Fly    48 ATGDIHGNIDGVFEWISPEGVHVRVSYKADENGYQPQSDLLPTPPPIPAAILKAIAYIEANPSKN 112
            .|.....|..|.:.:..|:||..||:|.||..|:|||...||..||:|..:||::..|.|||.::
Mosquito    66 QTSYDGANAAGEYSYTGPDGVLYRVAYNADTYGFQPQGAHLPVEPPVPDHVLKSLEEIRANPPRD 130

  Fly   113  112
            Mosquito   131  130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp3NP_476621.1 Chitin_bind_4 <46..81 CDD:459790 11/34 (32%)
LOC1270060XP_308723.3 Chitin_bind_4 52..99 CDD:459790 13/46 (28%)

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