DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and Lcp65Ag3

DIOPT Version :9

Sequence 1:NP_001260802.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_652662.1 Gene:Lcp65Ag3 / 59159 FlyBaseID:FBgn0086611 Length:105 Species:Drosophila melanogaster


Alignment Length:106 Identity:29/106 - (27%)
Similarity:52/106 - (49%) Gaps:12/106 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KFVMILAVVGVATALAPVSRSDDVHADVLSRSDDVRADGFDSSLHTSNGIEQAASGDAHG----- 62
            ||:::...:......||.:....:   |.|.| ||..:.|.....||:|....|.|..:.     
  Fly     2 KFLIVFVALFAVALAAPAAEEPTI---VRSES-DVGPESFKYDWETSDGQAAQAVGQLNDIGTEN 62

  Fly    63 ---NIHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPP 100
               ::.|::.:|:.:|:..:|.|:|::||:||.||.:|..|
  Fly    63 EAISVSGSYRFIADDGQTYQVNYIADKNGFQPEGAHLPVAP 103

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_001260802.1 Chitin_bind_4 42..89 CDD:278791 13/54 (24%)
Lcp65Ag3NP_652662.1 Chitin_bind_4 37..92 CDD:278791 13/54 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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