DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and LOC4578438

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_001238117.2 Gene:LOC4578438 / 4578438 VectorBaseID:AGAMI1_006281 Length:135 Species:Anopheles gambiae


Alignment Length:140 Identity:37/140 - (26%)
Similarity:62/140 - (44%) Gaps:23/140 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FKFVMILAVVGVAT-ALAPVSRSDDVHADVLSRSDDVRADGFDSSLHTSN-GIEQAASGDAHG-N 63
            ||:.::.|||..|: |:.||:.....:||..:...      |:.|:|..: |..::...:.|| |
Mosquito     3 FKYCIVFAVVAAASAAVLPVAVKHIEYADAPAEYQ------FEYSVHDDHTGDIKSQHEERHGDN 61

  Fly    64 IHGNFGWISPEGEHVEVKYVANE-NGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAP------- 120
            :.|.:..|..:|....|:|.|:| ||:.......|....||  :|:.||.:.....||       
Mosquito    62 VVGQYTLIDADGYRRVVEYTADEHNGFNAVVRREPVKTAIP--VAKVVAPIAKVYAAPIPKVAVP 124

  Fly   121 ----EHPRHH 126
                .:|.:|
Mosquito   125 VAKVAYPAYH 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 15/49 (31%)
LOC4578438XP_001238117.2 None

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