DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and Ccp84Ac

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_649681.1 Gene:Ccp84Ac / 40823 FlyBaseID:FBgn0004781 Length:217 Species:Drosophila melanogaster


Alignment Length:192 Identity:35/192 - (18%)
Similarity:59/192 - (30%) Gaps:67/192 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FKFVMILA--VVGVATALAPVSRSD------DVHA----------DVLSRSDDVRADGFDSSLHT 48
            ||.|.:::  :..|:..|.||.:.|      ..|.          ::.....:|..|......:.
  Fly     3 FKLVALVSCCLAAVSAGLIPVEQHDQHPQLYQAHQPQHVIYQKQHEIHPHGHEVYPDDPHPKYNF 67

  Fly    49 SNGIEQAASGDAHGN--------IHGNFGWISPEGEHVEVKYVANE-NGY--------------- 89
            :..::.|.|||:...        :.|.:.....:|....|||.|:. ||:               
  Fly    68 AYDVQDALSGDSKSQVESRDGDVVQGEYSLDDADGFRRTVKYTADSVNGFNAVVHREPLAHVHHK 132

  Fly    90 ------------------------QPSGAWIPTPPPIPEAIARAVAWLESHPPAP-EHPRHH 126
                                    .||.|::......|...|.|.|..::..|.. ||.:||
  Fly   133 VVAAAPVQYHHAPAAAAAVIKSYASPSQAYVAPTYAAPAYTAPAYATHQAEQPQEREHQQHH 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 11/55 (20%)
Ccp84AcNP_649681.1 Chitin_bind_4 65..117 CDD:459790 11/51 (22%)

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