DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and Edg78E

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_524198.1 Gene:Edg78E / 40354 FlyBaseID:FBgn0000551 Length:122 Species:Drosophila melanogaster


Alignment Length:124 Identity:49/124 - (39%)
Similarity:76/124 - (61%) Gaps:12/124 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKFVMILAVVGVATALAPVSRSDDVHADVLSRS---DDVRADG-FDSSLHTSNGIEQAASGDAH 61
            |:|::..||::|.|.|       |:::.|...||   |...|:| :..:..|||||:...:|:|:
  Fly     1 MYKYLFCLALIGCACA-------DNINKDAQIRSFQNDATDAEGNYQYAYETSNGIQIQEAGNAN 58

  Fly    62 GNIHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAP 120
            | ..|...::||||||:.:.|.|:|.||.|.|..:|||||:|..:.||:.::.:|||||
  Fly    59 G-ARGAVAYVSPEGEHISLTYTADEEGYHPVGDHLPTPPPVPAYVLRALEYIRTHPPAP 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 18/46 (39%)
Edg78ENP_524198.1 Chitin_bind_4 39..85 CDD:459790 18/46 (39%)

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