DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp2 and Cpr78Cb

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_649299.2 Gene:Cpr78Cb / 40353 FlyBaseID:FBgn0037068 Length:140 Species:Drosophila melanogaster


Alignment Length:87 Identity:32/87 - (36%)
Similarity:52/87 - (59%) Gaps:5/87 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LSRSDDVRADG-FDSSLHTSNGIEQAASGDAHGNIHGNFGWISPEGEHVEVKYVANENGYQPSGA 94
            :|.:||   :| |..:..|||||:..|:|.....| |.:.:.||||..:|.:|:|:|.|:...|.
  Fly    46 VSPTDD---EGVFKYAFKTSNGIDVQAAGSPLETI-GIYSYTSPEGVPIETRYIADELGFHVVGR 106

  Fly    95 WIPTPPPIPEAIARAVAWLESH 116
            .:|.|||.|:.|.|::.::.:|
  Fly   107 HLPQPPPTPDYILRSLEYIRTH 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 18/46 (39%)
Cpr78CbNP_649299.2 Chitin_bind_4 55..101 CDD:459790 18/46 (39%)

Return to query results.
Submit another query.