DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and Cpr78Ca

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_649298.2 Gene:Cpr78Ca / 40352 FlyBaseID:FBgn0037067 Length:127 Species:Drosophila melanogaster


Alignment Length:80 Identity:30/80 - (37%)
Similarity:45/80 - (56%) Gaps:4/80 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FDSSLHTSNGIEQAASGDAHGNIHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAI 106
            :.....|:|||....:|:.:|.: |...::||||..|...|||:.|||||:|..||.   ||..:
  Fly    46 YSFEFQTTNGITTKGAGNENGAV-GVVQFVSPEGIPVTFSYVADANGYQPTGDHIPA---IPLHV 106

  Fly   107 ARAVAWLESHPPAPE 121
            .|.:.::.:|||..|
  Fly   107 IRQLEYIRTHPPVDE 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 16/46 (35%)
Cpr78CaNP_649298.2 Chitin_bind_4 46..92 CDD:459790 16/46 (35%)

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