DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and Cpr65Eb

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_648076.3 Gene:Cpr65Eb / 38774 FlyBaseID:FBgn0035736 Length:179 Species:Drosophila melanogaster


Alignment Length:128 Identity:46/128 - (35%)
Similarity:73/128 - (57%) Gaps:6/128 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VMILAVVGVATAL-APVSRSDDVHADVLSRSDDVR-ADG-FDSSLHTSNGIEQAASGDAHGNIHG 66
            |::|..:.|...: |..|.|.|.||::.|..:::: .|| ::....|||||.|...|.......|
  Fly     6 VVVLVAMSVLLGVQARPSDSPDAHAEIRSFVNELKQEDGIYNYQFETSNGIAQQEQGVGGYYASG 70

  Fly    67 NFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAP---EHPRHH 126
            :..:.:|||:.:::.|.|:|||:||.|..:|||.||||||.:::.:..:||...   ||..||
  Fly    71 SSQYYTPEGQLIQLTYTADENGFQPQGEHLPTPHPIPEAILKSLEYNRNHPEEDGEYEHHDHH 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 15/46 (33%)
Cpr65EbNP_648076.3 Chitin_bind_4 46..93 CDD:459790 15/46 (33%)

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