DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and Cpr49Ab

DIOPT Version :9

Sequence 1:NP_001260802.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_610769.1 Gene:Cpr49Ab / 36345 FlyBaseID:FBgn0050042 Length:259 Species:Drosophila melanogaster


Alignment Length:98 Identity:32/98 - (32%)
Similarity:50/98 - (51%) Gaps:15/98 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VLSRSDDVRADGFDSSLHTSNGIEQAASGDAHGNIH-----------GNFGWISPEGEHVEVKYV 83
            ::.:.|||..||:.....|.|||    .|:..|.|.           |.:.:..|:|....|.||
  Fly   161 IIRQEDDVEVDGYHYLWETENGI----LGEESGRIEKLTEEEGLRSKGFYEYTGPDGILYRVDYV 221

  Fly    84 ANENGYQPSGAWIPTPPPIPEAIARAVAWLESH 116
            |::||:.||.|.:||.||.|..:.:.:|:||::
  Fly   222 ADDNGFVPSAAHLPTAPPPPPYVEKLLAFLEAN 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_001260802.1 Chitin_bind_4 42..89 CDD:278791 15/57 (26%)
Cpr49AbNP_610769.1 Chitin_bind_4 173..227 CDD:278791 15/57 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439140
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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