DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and Cpr47Ef

DIOPT Version :9

Sequence 1:NP_001260802.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_610660.2 Gene:Cpr47Ef / 36194 FlyBaseID:FBgn0033603 Length:612 Species:Drosophila melanogaster


Alignment Length:91 Identity:37/91 - (40%)
Similarity:55/91 - (60%) Gaps:9/91 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 VLSRSDDVRADG-FDSSLHTSNGIEQAASGDAHG--------NIHGNFGWISPEGEHVEVKYVAN 85
            :||..::...|| :..|..|.|||:....|....        ::.|::.:.:||||.||:.|.|:
  Fly   136 ILSFVNENDGDGNYRFSYETGNGIKAQEEGTVKNKGSENEIPSVMGSYSYTNPEGELVEIMYTAD 200

  Fly    86 ENGYQPSGAWIPTPPPIPEAIARAVA 111
            |||:.|||..:|||||||||||:::|
  Fly   201 ENGFVPSGNALPTPPPIPEAIAKSLA 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_001260802.1 Chitin_bind_4 42..89 CDD:278791 17/54 (31%)
Cpr47EfNP_610660.2 Chitin_bind_4 149..204 CDD:278791 17/54 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439298
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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