DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp2 and Lcp1

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_476619.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster


Alignment Length:130 Identity:117/130 - (90%)
Similarity:121/130 - (93%) Gaps:4/130 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKFVMILAVVGVATALAPV----SRSDDVHADVLSRSDDVRADGFDSSLHTSNGIEQAASGDAH 61
            |||||||.||:|:|.|..||    .||:||||||||:||||||||||||||||||||||||||||
  Fly     1 MFKFVMICAVLGLAVANPPVPHSLGRSEDVHADVLSQSDDVRADGFDSSLHTSNGIEQAASGDAH 65

  Fly    62 GNIHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAPEHPRHH 126
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    66 GNIHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAPEHPRHH 130

  Fly   127  126
              Fly   131  130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 46/46 (100%)
Lcp1NP_476619.1 Chitin_bind_4 46..93 CDD:459790 46/46 (100%)

Return to query results.
Submit another query.