DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and LOC1279290

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_318989.4 Gene:LOC1279290 / 1279290 VectorBaseID:AGAMI1_008277 Length:134 Species:Anopheles gambiae


Alignment Length:134 Identity:48/134 - (35%)
Similarity:76/134 - (56%) Gaps:13/134 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KFVMILAVVGVATALAPVSRSDDVHADVLSRSDDVRADG-FDSSLHTSNGI--------EQAASG 58
            |..::|.:.....||:...|| |..|::|.:.:::..|| :..|..|:|||        ::|.|.
Mosquito     2 KCEIVLLLACATLALSAPQRS-DAEAEILQQDNNIEPDGQYQYSYETANGIRGQETGTLKRANSP 65

  Fly    59 DAHGNI--HGNFGWISPEGEHVEVKYVA-NENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAP 120
            |....|  .|:..:.:|:|:.||:.|.| :|||:||:||.:|||||||..|.:|:.:|.|.||:.
Mosquito    66 DTSDVIVAAGSITYTAPDGQVVELSYTADDENGFQPAGAHLPTPPPIPPQIQKALDYLASLPPSA 130

  Fly   121 EHPR 124
            ...|
Mosquito   131 NRRR 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 18/57 (32%)
LOC1279290XP_318989.4 Chitin_bind_4 41..99 CDD:459790 18/57 (32%)

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