DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and LOC1277342

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_316784.4 Gene:LOC1277342 / 1277342 VectorBaseID:AGAMI1_015005 Length:227 Species:Anopheles gambiae


Alignment Length:127 Identity:36/127 - (28%)
Similarity:57/127 - (44%) Gaps:22/127 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKFVMILAVVGVATALAPVSRSDDVHAD-----VLSRSDDVRADG-FDSSLHTSNGIEQAASGD 59
            ||:||::..::..|||    ..:...|.|     :||.......|| |.::....:|.:.....|
Mosquito     1 MFRFVLLSTLLVAATA----QYNGGYHRDPKTAAILSEQRYQSGDGKFGAAYTQEDGTDFKEETD 61

  Fly    60 AHGNIHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAPE 121
            ..||..|::.::.|.|:...:.|||.:||:|.||..:|..||.|.            .|||:
Mosquito    62 EQGNRRGSYSYVDPTGQRRTISYVAGKNGFQASGDHLPVAPPAPP------------QPAPQ 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 12/46 (26%)
LOC1277342XP_316784.4 Chitin_bind_4 47..91 CDD:459790 11/43 (26%)

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