DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp2 and LOC1276767

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_316152.5 Gene:LOC1276767 / 1276767 VectorBaseID:AGAMI1_000091 Length:150 Species:Anopheles gambiae


Alignment Length:132 Identity:43/132 - (32%)
Similarity:73/132 - (55%) Gaps:11/132 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKFVMILAVVGVATAL----APVSR-----SDDVHADVLSRSDDVRADG-FDSSLHTSNGIEQA 55
            |:|..:||....:|..|    ||:::     ..|..|.|:::...:...| :..:..|||||:..
Mosquito     1 MYKQSLILLSCALALTLAAPPAPLTKRSPQGGPDAEATVVAQDQIINEGGSYAYNYETSNGIKAR 65

  Fly    56 ASGDAHGNIHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPA- 119
            .:.|...:.:|.:.:::|:|....|.|||:|||:||.||.:||.||.||.:.:.:..|.::||: 
Mosquito    66 QTSDNGVSANGEYSFLAPDGTSYSVVYVADENGFQPQGAHLPTEPPAPEHVIKLLEDLRANPPSD 130

  Fly   120 PE 121
            ||
Mosquito   131 PE 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 15/46 (33%)
LOC1276767XP_316152.5 None

Return to query results.
Submit another query.