DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lcp2 and LOC1276149

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_315459.4 Gene:LOC1276149 / 1276149 VectorBaseID:AGAMI1_000569 Length:137 Species:Anopheles gambiae


Alignment Length:119 Identity:40/119 - (33%)
Similarity:63/119 - (52%) Gaps:5/119 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKFVMILAVVGVATALAPVSRSDDVHADVLSRSDDVRADG-FDSSLHTSNGIEQAASGDAHGNI 64
            |:|..:|.|:|.||.|..|    .|..|.||:....|..|| ::....||||:....||....:.
Mosquito     1 MYKLFVIAALVAVAAAQNP----QDAQAQVLASDSVVNPDGSYNYRYETSNGLAAQESGVGGQSA 61

  Fly    65 HGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPP 118
            .|::.:...:|...:|.|||:|||:||.||.:|...|.|:.:.:.:..:.::||
Mosquito    62 QGSYSYTGDDGVQYQVSYVADENGFQPQGAHLPVDGPAPDHVLKTLEQIRANPP 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 14/46 (30%)
LOC1276149XP_315459.4 Chitin_bind_4 39..86 CDD:459790 14/46 (30%)

Return to query results.
Submit another query.