DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and LOC1272964

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_311895.4 Gene:LOC1272964 / 1272964 VectorBaseID:AGAMI1_008652 Length:200 Species:Anopheles gambiae


Alignment Length:93 Identity:24/93 - (25%)
Similarity:36/93 - (38%) Gaps:23/93 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VSRSDD-------VHADVLSRSDDVRAD---GFDSSLHTSNGI---EQAASGDAHGNIHGNFGWI 71
            |||:.|       .|.|....||..|.|   |:......|..|   ::..:||   .:.|.:..:
Mosquito    63 VSRTQDQEQQQQQQHQDRRESSDYDRDDYSYGYAVRDELSGDIKSQQEVRNGD---RVRGQYRTL 124

  Fly    72 SPEGEHVEVKYVANE-NGY------QPS 92
            ..:|....|.|.|:: .|:      |||
Mosquito   125 ESDGTERIVDYTADDVRGFNAVVRHQPS 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 9/50 (18%)
LOC1272964XP_311895.4 None

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