DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp2 and LOC1272758

DIOPT Version :10

Sequence 1:NP_476620.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster
Sequence 2:XP_311664.4 Gene:LOC1272758 / 1272758 VectorBaseID:AGAMI1_001020 Length:128 Species:Anopheles gambiae


Alignment Length:132 Identity:31/132 - (23%)
Similarity:52/132 - (39%) Gaps:26/132 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FKFVMIL----AVVGVATALAPVSRSDDVHADVLSRSDDVRADGFDSSLHTSNGIEQAASGDAHG 62
            |.||..|    |:.|...|:.||:.:..|..:.         |......:..| ::.|.:||:..
Mosquito     4 FVFVASLSAAVAMFGAHGAVVPVAPAVAVSTNY---------DPLPQYTYAYN-VQDALTGDSKS 58

  Fly    63 N--------IHGNFGWISPEGEHVEVKYVANE-NGYQPSGAWIPTPPPIPEAIARAVAWLESHPP 118
            .        :.|::..:.|:|....|.|.|:. ||:   .|.:...|.:|:|:....|......|
Mosquito    59 QQETRDGDIVRGSYSLVEPDGTLRTVFYTADPVNGF---NAVVQRGPLVPKAVVPVAAGPAILAP 120

  Fly   119 AP 120
            ||
Mosquito   121 AP 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp2NP_476620.1 Chitin_bind_4 42..89 CDD:459790 11/55 (20%)
LOC1272758XP_311664.4 Chitin_bind_4 42..94 CDD:459790 11/52 (21%)

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