DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp1 and CG8927

DIOPT Version :10

Sequence 1:NP_476619.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster
Sequence 2:NP_650527.2 Gene:CG8927 / 41964 FlyBaseID:FBgn0038405 Length:371 Species:Drosophila melanogaster


Alignment Length:129 Identity:23/129 - (17%)
Similarity:39/129 - (30%) Gaps:45/129 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PPVPHSLGRSEDVHADVLSQSDDVRADGFDSSLH-----TSNGIEQAASGDAHGNI--------- 68
            ||.|.:..|.:.|....:...:.::.|..|....     .|..|.:....:..|:|         
  Fly   219 PPQPMARPRPKPVQPRPIIDQNQLQDDHVDQQQQRRRQPVSQTIRKWREENEDGSITWGYENDDG 283

  Fly    69 -------------HGNFGWISPEGEHVEVKYVA---------------NENG---YQPSGAWIP 101
                         .|.:|::.|:|...|..|..               .|||   |:.:.|.:|
  Fly   284 SFKEELIGTDCITKGTYGYVDPDGNKREYHYETGIKCDPNNRNNEEELQENGFVNYEENRAVLP 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp1NP_476619.1 Chitin_bind_4 46..93 CDD:459790 14/91 (15%)
CG8927NP_650527.2 Chitin_bind_4 277..336 CDD:459790 8/58 (14%)

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