DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp1 and Cpr78Cb

DIOPT Version :9

Sequence 1:NP_001260801.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster
Sequence 2:NP_001262144.1 Gene:Cpr78Cb / 40353 FlyBaseID:FBgn0037068 Length:140 Species:Drosophila melanogaster


Alignment Length:87 Identity:32/87 - (36%)
Similarity:52/87 - (59%) Gaps:5/87 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LSQSDDVRADG-FDSSLHTSNGIEQAASGDAHGNIHGNFGWISPEGEHVEVKYVANENGYQPSGA 98
            :|.:||   :| |..:..|||||:..|:|.....| |.:.:.||||..:|.:|:|:|.|:...|.
  Fly    46 VSPTDD---EGVFKYAFKTSNGIDVQAAGSPLETI-GIYSYTSPEGVPIETRYIADELGFHVVGR 106

  Fly    99 WIPTPPPIPEAIARAVAWLESH 120
            .:|.|||.|:.|.|::.::.:|
  Fly   107 HLPQPPPTPDYILRSLEYIRTH 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp1NP_001260801.1 Chitin_bind_4 46..93 CDD:278791 18/46 (39%)
Cpr78CbNP_001262144.1 Chitin_bind_4 55..101 CDD:278791 18/46 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470185
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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