DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp1 and Cpr65Eb

DIOPT Version :10

Sequence 1:NP_476619.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster
Sequence 2:NP_648076.3 Gene:Cpr65Eb / 38774 FlyBaseID:FBgn0035736 Length:179 Species:Drosophila melanogaster


Alignment Length:131 Identity:46/131 - (35%)
Similarity:72/131 - (54%) Gaps:12/131 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VMICAVLGLAVANPPVPHSLGRSEDVHADVLSQSDDVR-ADG-FDSSLHTSNGIEQAASGDAHGN 67
            |.:..:||:. |.|      ..|.|.||::.|..:::: .|| ::....|||||.|...|.....
  Fly    10 VAMSVLLGVQ-ARP------SDSPDAHAEIRSFVNELKQEDGIYNYQFETSNGIAQQEQGVGGYY 67

  Fly    68 IHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAP---EHPRH 129
            ..|:..:.:|||:.:::.|.|:|||:||.|..:|||.||||||.:::.:..:||...   ||..|
  Fly    68 ASGSSQYYTPEGQLIQLTYTADENGFQPQGEHLPTPHPIPEAILKSLEYNRNHPEEDGEYEHHDH 132

  Fly   130 H 130
            |
  Fly   133 H 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp1NP_476619.1 Chitin_bind_4 46..93 CDD:459790 15/46 (33%)
Cpr65EbNP_648076.3 Chitin_bind_4 46..93 CDD:459790 15/46 (33%)

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