DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp1 and Cpr65Eb

DIOPT Version :9

Sequence 1:NP_001260801.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster
Sequence 2:NP_648076.3 Gene:Cpr65Eb / 38774 FlyBaseID:FBgn0035736 Length:179 Species:Drosophila melanogaster


Alignment Length:131 Identity:46/131 - (35%)
Similarity:72/131 - (54%) Gaps:12/131 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VMICAVLGLAVANPPVPHSLGRSEDVHADVLSQSDDVR-ADG-FDSSLHTSNGIEQAASGDAHGN 67
            |.:..:||:. |.|      ..|.|.||::.|..:::: .|| ::....|||||.|...|.....
  Fly    10 VAMSVLLGVQ-ARP------SDSPDAHAEIRSFVNELKQEDGIYNYQFETSNGIAQQEQGVGGYY 67

  Fly    68 IHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAP---EHPRH 129
            ..|:..:.:|||:.:::.|.|:|||:||.|..:|||.||||||.:::.:..:||...   ||..|
  Fly    68 ASGSSQYYTPEGQLIQLTYTADENGFQPQGEHLPTPHPIPEAILKSLEYNRNHPEEDGEYEHHDH 132

  Fly   130 H 130
            |
  Fly   133 H 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp1NP_001260801.1 Chitin_bind_4 46..93 CDD:278791 15/46 (33%)
Cpr65EbNP_648076.3 Chitin_bind_4 46..93 CDD:278791 15/46 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470190
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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