DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp1 and Lcp2

DIOPT Version :9

Sequence 1:NP_001260801.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster
Sequence 2:NP_001260802.1 Gene:Lcp2 / 35818 FlyBaseID:FBgn0002533 Length:126 Species:Drosophila melanogaster


Alignment Length:130 Identity:117/130 - (90%)
Similarity:121/130 - (93%) Gaps:4/130 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKFVMICAVLGLAVANPPVPHSLGRSEDVHADVLSQSDDVRADGFDSSLHTSNGIEQAASGDAH 65
            |||||||.||:|:|.|..||    .||:||||||||:||||||||||||||||||||||||||||
  Fly     1 MFKFVMILAVVGVATALAPV----SRSDDVHADVLSRSDDVRADGFDSSLHTSNGIEQAASGDAH 61

  Fly    66 GNIHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAPEHPRHH 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    62 GNIHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPTPPPIPEAIARAVAWLESHPPAPEHPRHH 126

  Fly   131  130
              Fly   127  126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp1NP_001260801.1 Chitin_bind_4 46..93 CDD:278791 46/46 (100%)
Lcp2NP_001260802.1 Chitin_bind_4 42..89 CDD:278791 46/46 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470155
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0014369
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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