DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp1 and CG15756

DIOPT Version :9

Sequence 1:NP_001260801.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster
Sequence 2:NP_572895.1 Gene:CG15756 / 32308 FlyBaseID:FBgn0030493 Length:298 Species:Drosophila melanogaster


Alignment Length:128 Identity:29/128 - (22%)
Similarity:47/128 - (36%) Gaps:28/128 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LAVANPPVPHSL---GRSEDVHADVLSQSDDVRADGFDSSLHTSNGIEQAASGDAHGN-----IH 69
            |:|..|.:|.||   |...||.:.:          |..:.:.|..|.::.:..|...|     :.
  Fly   169 LSVEQPLLPRSLEVPGVERDVGSGM----------GMGTGIATGTGTKRNSISDPERNELPVEVE 223

  Fly    70 GNFGWISPEGEHVEVKYVANENGYQ--PSGAWIPTPPPIPEAIARAVAWLESHPPAPEHPRHH 130
            .|      |.|.|:|...|::.|.:  |:..........|..:|..:  |.:..||..|...|
  Fly   224 VN------EAEDVDVDVDASDAGTELVPNAVNQVETETEPSTLANDI--LATGAPADSHDDDH 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp1NP_001260801.1 Chitin_bind_4 46..93 CDD:278791 10/51 (20%)
CG15756NP_572895.1 Chitin_bind_4 108..162 CDD:278791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10380
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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