DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lcp1 and LOC1273355

DIOPT Version :10

Sequence 1:NP_476619.1 Gene:Lcp1 / 35817 FlyBaseID:FBgn0002531 Length:130 Species:Drosophila melanogaster
Sequence 2:XP_312322.1 Gene:LOC1273355 / 1273355 VectorBaseID:AGAMI1_001204 Length:137 Species:Anopheles gambiae


Alignment Length:118 Identity:34/118 - (28%)
Similarity:51/118 - (43%) Gaps:20/118 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FVMICAVL--GLAVANPPVPHSLG-----RSEDVHADVLSQSDDVRADGFDSSLHTSNGIEQAAS 61
            |..:|.||  |..|.:.|.|...|     ...||.. |...|::...||:..:...|:|..::..
Mosquito     7 FASVCCVLLAGRVVLSAPAPQQGGAPAGQNPNDVQT-VRYYSENNGLDGYKFTYELSDGQIRSEV 70

  Fly    62 G------DAHGN------IHGNFGWISPEGEHVEVKYVANENGYQPSGAWIPT 102
            |      ||.|.      :.|::.::.|:|:...|.|.|:||||.|.....||
Mosquito    71 GTYRDVKDAEGKDVKALFVQGSYSFVGPDGQTYWVNYTADENGYHPKVGTGPT 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lcp1NP_476619.1 Chitin_bind_4 46..93 CDD:459790 14/58 (24%)
LOC1273355XP_312322.1 Chitin_bind_4 55..114 CDD:459790 14/58 (24%)

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